Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015899448.1_cds_XP_016449435.1_43983
CDS Infomation

[gene=LOC107774425] [db_xref=GeneID:107774425] [protein=KH domain-containing protein At4g18375-like] [protein_id=XP_016449435.1] [location=complement(join(61667..61810,62208..62319,62468..62535,62786..63124,63379..63657,63717..64130,64580..65263))] [gbkey=CDS]
Sequence

ATGTCAATGAAGTTGACACCTTCCAAGCGGCCGCATGTTTGGAGCCTTGCAGAATCAAAT
GGCCGAGGGAAGTGGCAGAAATCAGCATCTATTAGTTCCCAGAAATCACCTCCGAAAGTT
CGTATACTATGCCCTGCTTCTAAGATAGATTCCTTTATCGGAGAGGATAGTAGCATCATT
TCTCGGATACAAGAGGAAACTGGTGCAGAGGTTCGAGTTGAGGATAGTGTTGTTGGTTGT
GATGAGAGGGTGATAGTTATTGTAGGTTCAGGAAAAGAAGATGAAGTGGGAACCGAACAG
CTCCAGGCTGATGTTGAGGTAACTGAAACTAAAGAAAAGGACAGTTGCACTGATGAAAAT
GGTGATAAGCGTGAGAATAAGGTGTCCCCTCCAGCAGAAAGCTCCAAAACTGAGAAGGAG
ACGCTATCTATTCAGAAAGCTCTATTCTTGGTATTTGATAGGATGATTGAAGGAAGAGTA
GGAATGGATGGAGGAGATGAAGAGGGTGACAATTCTTCCTCATTAATTATAAGATTGCTT
ATACTCTCCAGTCAAGTGGGATGTTTGTTAGGAAAAGCTGGTAGTGTGATAAAGCAGATG
TCTTCTGAAAGTGGGGCACAGATACAGGTTCTTCCCAAGGACAAACGACCTTCTTGTGCG
TCTTCATCTGAAGAATTGGTTCAGATTTCTGGGGAGCGTGAGGCAGTTAAAAAAGCTCTT
GAAGTCGTTGCTCGGCAATTACTTGAGAATTCCTCTTGGGATCAGGATTTTCTCTCTGCT
GATGCTGGTGGTCCATCTTCTCAGTCTCCTGGCCATCCTCTGTCTAACCAGGAATTGCAT
CCACCATCAGCACGTCCTTACCGTGGGCAGGGGCCACCGTCCTCTGTTGGATCTCGTGAT
GGGGAAGTTGGTATACCTGGCCGAATGAACCCTATTCCTGATGCCTTGACTTTCAGATTA
CTTTGTCCGGATGAAAAAGTTGGAGGTATAATTGGAAAGGGAGGAAGTATAATCAAAGCA
CTTCAGCATGAGACTGGGTGTCAGATCAAAGTTCTGGAAGGTGCAGGGGATTCTGAAGAT
CGAGTTATTNTTCTTCTTGCTAAGGTCATTCTATTTATGCAGCACCCAGATGATAGGATA
TCTTTGCCGCAAGATGCTGTCCTTCGCATTCAATCCCGAATTTGTCGGGCTGCACCTGAG
AACAAGGACAATGGCATGGTTGCAAAACTTTTGGTGTTCTCAAATCAAATTGGATGCCTC
TTGGGTAAAGGTGGCGGTATAATAGCTGAAATGAGGAAGTCAACTGGAGCCTATATTCGT
ATCGTAGGCAAGGATCAAACCCCAAAGTTTGCGTCAGAAAATGAAGAAGTAGTTCAGGTA
AATGGAGACTTTGAAAAAGTTTGTGAAGCCCTTCTGCAGATTACCACCAGATTGCAGAAT
CATTACTTTCGTGATGCATTTCCTTCAAACCCTGGTTTCCTGGACCAAATAACTCCATTC
CCTTCACACATGGGAAGAAGAGAGTTTTCACCTCCAGGCATGTTCTCTAACATTCGTCCA
TCATTTCACAAGTTTGATGCTGTTGGTGTCCTACCTCCACATGGTGGTTTCCATCCACAT
GATGATCGTCCTCCCTTTATGCAAAATTTCCGTAGGCCAGGCATTCCACCTCATATATCT
GATAGAATGCCATCTTCAGCACCATGGGGTTCTCAGGGACTGGGTGAAGGTGGGGGCTTC
CCAGACTATGCGGGAGGTCCTCGAAGTATTGGCGGATTTGGAGGAGGAAGTCATCCAGCT
GTGATCACAAGCACTACTGTCGAAGTAGTTGTACCTCGATCTGTCGTTCCTGCAATCTAT
GGAGAAGGTGGGGGATGTCTTCGACAAATATGTGAGATTTCTGATGCAAAAGTCACCATA
AATGATCCCAAGCCTGGAGCAACAGAGACTGTTATCATTATATCTGGGACGCCTGAGCAG
ACTAATGCTGCTCAAAGTCTCATCCAAGCCTTTGTAATGGTCGAGACTGAAGCTGCTTGA

Peptide Sequence

PEP ID

XP_016449435.1
PEP Infomation

PREDICTED: KH domain-containing protein At4g18375-like [Nicotiana tabacum]
Sequence

MSMKLTPSKRPHVWSLAESNGRGKWQKSASISSQKSPPKVRILCPASKIDSFIGEDSSII
SRIQEETGAEVRVEDSVVGCDERVIVIVGSGKEDEVGTEQLQADVEVTETKEKDSCTDEN
GDKRENKVSPPAESSKTEKETLSIQKALFLVFDRMIEGRVGMDGGDEEGDNSSSLIIRLL
ILSSQVGCLLGKAGSVIKQMSSESGAQIQVLPKDKRPSCASSSEELVQISGEREAVKKAL
EVVARQLLENSSWDQDFLSADAGGPSSQSPGHPLSNQELHPPSARPYRGQGPPSSVGSRD
GEVGIPGRMNPIPDALTFRLLCPDEKVGGIIGKGGSIIKALQHETGCQIKVLEGAGDSED
RVIXLLAKVILFMQHPDDRISLPQDAVLRIQSRICRAAPENKDNGMVAKLLVFSNQIGCL
LGKGGGIIAEMRKSTGAYIRIVGKDQTPKFASENEEVVQVNGDFEKVCEALLQITTRLQN
HYFRDAFPSNPGFLDQITPFPSHMGRREFSPPGMFSNIRPSFHKFDAVGVLPPHGGFHPH
DDRPPFMQNFRRPGIPPHISDRMPSSAPWGSQGLGEGGGFPDYAGGPRSIGGFGGGSHPA
VITSTTVEVVVPRSVVPAIYGEGGGCLRQICEISDAKVTINDPKPGATETVIIISGTPEQ
TNAAQSLIQAFVMVETEAA

Transcript Sequence

Gene sequence data has not been registered.